OCTOCORALLIA References, CORAL Magazine Jan/Feb 2020

OCTOCORALLIA: A closer look at the eight-tentacled wonders we know as soft corals - by Ronald L. Shimek, Ph.D.

OCTOCORALLIA: A closer look at the eight-tentacled wonders we know as soft corals
by Ronald L. Shimek, Ph.D.


Abdel-Lateff, A., Alarif, W.M., Alburae, N.A. and Algandaby, M.M., 2019. Alcyonium Octocorals: Potential Source of Diverse Bioactive Terpenoids. Molecules, 24(7), p.1370.

Alderslade, P. and McFadden, C.S., 2011. A new sclerite-free genus and species of Clavulariidae (Coelenterata: Octocorallia). Zootaxa, 3104(1), pp.64-68.

Bayer, F.M. and Muzik, K.M., 1976. A new solitary octocoral, Taiaroa tauhou gen. et sp. nov.(Coelenterata: Protoalcyonaria) from New Zealand. Journal of the Royal Society of New Zealand, 6(4), pp.499-515.

Bayer, F.M., 1955. Contributions to the nomenclature, systematics, and morphology of the Octocorallia. Proceedings of the United States National Museum. 105: 207-220. 8 plates

Bayer, F.M. and Muzik, K.M., 1977. An Atlantic helioporan coral (Coelenterata: Octocorallia). Proc. Biol. Soc. Wash. 90(4), 975-984.

Bayer, Frederick M., “The Helioporacean Octocoral Epiphaxum, Recent and Fossil: A Monographic Iconography” (1992). Studies in Tropical Oceanography. 15.  https://scholarlyrepository.miami.edu/trop_ocean/15

Benayahu Y, McFadden CS, Shoham E (2017) Search for mesophotic octocorals (Cnidaria, Anthozoa) and their phylogeny: I. A new sclerite-free genus from Eilat, northern Red Sea. ZooKeys 680: 1–11. https://doi.org/10.3897/zookeys.680.12727

Brockman, S.A. and McFadden, C.S., 2012. The mitochondrial genome of Paraminabea aldersladei (Cnidaria: Anthozoa: Octocorallia) supports intramolecular recombination as the primary mechanism of gene rearrangement in octocoral mitochondrial genomes. Genome Biology And Evolution, 4(9), pp.994-1006.

Buckeridge, J.S., Campbell, H.J. and Maurizot, P., 2014. Unravelling the nature of Waiparaconus, a pennatulacean (Cnidaria: Octocorallia) from the Late Mesozoic–Early Cainozoic of the Southern Hemisphere. Integrative zoology, 9(2), pp.111-120.

Cairns, SD. 2011. A Revision of the Primnoidae (Octocorallia: Alcyonacea) from the Aleutian Islands and Bering Sea. Smithsonian Contributions to Zoology, number 634, vi+ 55 pages, 17 figures, 3 tables.

Darroch, S.A., Smith, E.F., Laflamme, M. and Erwin, D.H., 2018. Ediacaran extinction and Cambrian explosion. Trends in ecology & evolution, 33(9), pp.653-663.

Darroch, S.A., Sperling, E.A., Boag, T.H., Racicot, R.A., Mason, S.J., Morgan, A.S., Tweedt, S., Myrow, P., Johnston, D.T., Erwin, D.H. and Laflamme, M., 2015. Biotic replacement and mass extinction of the Ediacara biota. Proceedings of the Royal Society B: Biological Sciences, 282(1814), p.20151003.

Erwin, D.H., 2008. Extinction as the loss of evolutionary history. Proceedings of the National Academy of Sciences, 105(Supplement 1), pp.11520-11527.

Erwin, D.H., 2008. Wonderful Ediacarans, wonderful cnidarians?. Evolution and Development, 10(3), pp.263-264.

Erwin, D.H., 2009. Early origin of the bilaterian developmental toolkit. Philosophical Transactions of the Royal Society B: Biological Sciences, 364(1527), pp.2253-2261.

Erwin, D.H., 2015. Early metazoan life: divergence, environment and ecology. Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1684), p.20150036.

Erwin, D.H., 2015. Was the Ediacaran–Cambrian radiation a unique evolutionary event?. Paleobiology, 41(1), pp.1-15.

Erwin, D.H., Laflamme, M., Tweedt, S.M., Sperling, E.A., Pisani, D. and Peterson, K.J., 2011. The Cambrian conundrum: early divergence and later ecological success in the early history of animals. science, 334(6059), pp.1091-1097.

Erwin, D.H. and Davidson, E.H., 2009. The evolution of hierarchical gene regulatory networks. Nature Reviews Genetics, 10(2), p.141.

Goldberg, W.M., 2018. Coral food, feeding, nutrition, and secretion: A Review. In: Marine Organisms as Model Systems in Biology and Medicine (pp. 377-421). Springer, Cham.

Han, J., Zhang, X. and Komiya, T., 2016. Integrated evolution of cnidarians and oceanic geochemistry before and during the Cambrian explosion. In: The Cnidaria, Past, Present and Future (pp. 15-29). Springer, Cham.

Hoffman, P.F., Abbot, D.S., Ashkenazy, Y., Benn, D.I., Brocks, J.J., Cohen, P.A., Cox, G.M., Creveling, J.R., Donnadieu, Y., Erwin, D.H. and Fairchild, I.J., 2017. Snowball Earth climate dynamics and Cryogenian geology-geobiology. Science Advances, 3(11), p.e1600983.

Lau, Y.W. and Reimer, J.D., 2019. Zooxanthellate, Sclerite-Free, and Pseudopinnuled Octocoral Hadaka nudidomus gen. nov. et sp. nov.(Anthozoa, Octocorallia) from Mesophotic Reefs of the Southern Ryukyus Islands. Diversity, 11(10), p.176.

Lau, Y.W., Stokvis, F.R., Imahara, Y. and Reimer, J.D., 2019. The stoloniferous octocoral, Hanabira yukibana, gen. nov., sp. nov., of the southern Ryukyus has morphological and symbiont variation. Contributions to Zoology, 88(1), pp.54-77.

Luan, N.T., Rahman, M.A., Maki, T., Iwasaki, N. and Hasegawa, H., 2013. Growth characteristics and growth rate estimation of Japanese precious corals. Journal of experimental marine biology and ecology, 441, pp.117-125.

Lewis, J.B., 1982. Feeding behaviour and feeding ecology of the Octocorallia (Coelenterata: Anthozoa). Journal of Zoology, 196(3), pp.371-384.

Lopez-Gonzalez, P., Bramanti, L., Escribano-Álvarez, P., Benedetti, M., Martínez-Baraldés, I., & Megina, C. (2018). Thread-like tentacles in the Mediterranean corals Paramuricea clavata and Corallium rubrumMediterranean Marine Science, 19(2), pp. 394-397.

Maloof, A.C., Rose, C.V., Beach, R., Samuels, B.M., Calmet, C.C., Erwin, D.H., Poirier, G.R., Yao, N. and Simons, F.J., 2010. Possible animal-body fossils in pre-Marinoan limestones from South Australia. Nature Geoscience, 3(9), p.653.

Mantelatto, M. C., Silva, A. G. da, Louzada, T. dos S., McFadden, C. S., & Creed, J. C. (2018). Invasion of aquarium origin soft corals on a tropical rocky reef in the southwest Atlantic, Brazil. Marine Pollution Bulletin, 130, 84–94. doi:10.1016/j.marpolbul.2018.03.014

McFadden, C.S., Alderslade, P., Van Ofwegen, L.P., Johnsen, H. and Rusmevichientong, A., 2006. Phylogenetic relationships within the tropical soft coral genera Sarcophyton and Lobophytom (Anthozoa, Octocorallia). Invertebrate Biology, 125(4), pp.288-305.

McFadden, C.S., Benayahu, Y., Pante, E., Thoma, J.N., Nevarez, P.A. and France, S.C., 2011. Limitations of mitochondrial gene barcoding in Octocorallia. Molecular Ecology Resources, 11(1), pp.19-31.

McFadden, C.S., France, S.C., Sánchez, J.A. and Alderslade, P., 2006. A molecular phylogenetic analysis of the Octocorallia (Cnidaria: Anthozoa) based on mitochondrial protein-coding sequences. Molecular Phylogenetics And Evolution, 41(3), pp.513-527.

McFadden, C.S., Sánchez, J.A. and France, S.C., 2010. Molecular phylogenetic insights into the evolution of Octocorallia: a review.  From the symposium ‘‘Assembling the Cnidarian Tree of Life’’ presented at the annual meeting of the Society for Integrative and Comparative Biology, January 3–7, 2010, at Seattle, Washington.

Park, E., Hwang, D.S., Lee, J.S., Song, J.I., Seo, T.K. and Won, Y.J., 2012. Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record. Molecular Phylogenetics And Evolution, 62(1), pp.329-345.

Peel, J.S., 2017. A problematic cnidarian (Cambroctoconus; Octocorallia?) from the Cambrian (Series 2–3) of Laurentia. Journal of Paleontology, 91(5), pp.871-882.

Pérez, C.D., de Moura Neves, B., Cordeiro, R.T., Williams, G.C. and Cairns, S.D., 2016. Diversity and distribution of Octocorallia. In: The Cnidaria, Past, Present and Future (pp. 109-123). Springer, Cham.

Plaza, P.U., Mehrotra, R., Scott, C.M. and Reimer, J.D., 2018. Rare zooxanthellate Nanipora octocoral (Helioporacea) in the Gulf of Thailand. Marine Biodiversity, 48(4), pp.1961-1967.

Reimer, J.D., Lau, Y.W., Boo, W.H. and Soong, K., 2018. Living fossil Nanipora (Anthozoa: Octocorallia) as the dominant calcifying benthos in a seagrass meadow in the South China Sea. Matters Select, 4(2), p.e201802000001.

Reinhard, C.T., Planavsky, N.J., Olson, S.L., Lyons, T.W. and Erwin, D.H., 2016. Earth’s oxygen cycle and the evolution of animal life. Proceedings of the National Academy of Sciences, 113(32), pp.8933-8938.

Richards, Z.T., Yasuda, N., Kikuchi, T., Foster, T., Mitsuyuki, C., Stat, M., Suyama, Y. and Wilson, N.G., 2018. Integrated evidence reveals a new species in the ancient blue coral genus Heliopora (Octocorallia). Scientific Reports, 8(1), p.15875.

Sammarco, P.W., Coll, J.C., La Barre, S. and Willis, B., 1983. Competitive strategies of soft corals (Coelenterata: Octocorallia): allelopathic effects on selected scleractinian corals. Coral Reefs, 1(3), pp.173-178.

Sanchez, J.A., 2005. Systematics of the bubblegum corals (Cnidaria: Octocorallia: Paragorgiidae) with description of new species from New Zealand and the Eastern Pacific. Zootaxa, 1014(1), pp.1-72.

Soetaert, K., Mohn, C., Rengstorf, A., Grehan, A. and Van Oevelen, D., 2016. Ecosystem engineering creates a direct nutritional link between 600-m deep cold-water coral mounds and surface productivity. Scientific Reports, 6, p.35057.

Tyler, P.A., Bronsdon, S.K., Young, C.M. and Rice, A.L., 1995. Ecology and gametogenic biology of the genus Umbellula (Pennatulacea) in the North Atlantic Ocean. Internationale Revue der gesamten Hydrobiologie und Hydrographie, 80(2), pp.187-199.

Vargas, S., Breedy, O. and Guzman, H.M., 2010. The phylogeny of Pacifigorgia (Coelenterata, Octocorallia, Gorgoniidae): a case study of the use of continuous characters in the systematics of the Octocorallia. Zoosystema, 32(1), pp.5-18.

Watling, L. and France, S.C., 2011. A new genus and species of bamboo coral (Octocorallia: Isididae: Keratoisidinae) from the New England seamounts. Bulletin of the Peabody Museum of Natural History, 52(2), pp.209-221.

Williams, G.C., 2011. The global diversity of sea pens (Cnidaria: Octocorallia: Pennatulacea). PLoS One, 6(7), p.e22747.

Williams, G.C., Hoeksema, B.W. and van Ofwegen, L.P., 2012. A fifth morphological polyp in pennatulacean octocorals, with a review of polyp polymorphism in the genera Pennatula and Pteroeides (Anthozoa: Pennatulidae). Zoological Studies, 51(7), pp.1006-1017.

Zapata, F., Goetz, F.E., Smith, S.A., Howison, M., Siebert, S., Church, S.H., Sanders, S.M., Ames, C.L., McFadden, C.S., France, S.C. and Daly, M., 2015. Phylogenomic analyses support traditional relationships within Cnidaria. PLoS One, 10(10), p.e0139068.

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